/* ---------------------------------------------------------------------- LAMMPS - Large-scale Atomic/Molecular Massively Parallel Simulator http://lammps.sandia.gov, Sandia National Laboratories Steve Plimpton, sjplimp@sandia.gov Copyright (2003) Sandia Corporation. Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation, the U.S. Government retains certain rights in this software. This software is distributed under the GNU General Public License. See the README file in the top-level LAMMPS directory. ------------------------------------------------------------------------- */ #ifdef ATOM_CLASS AtomStyle(body,AtomVecBody) #else #ifndef LMP_ATOM_VEC_BODY_H #define LMP_ATOM_VEC_BODY_H #include "atom_vec.h" #include "my_pool_chunk.h" namespace LAMMPS_NS { class AtomVecBody : public AtomVec { public: class Body *bptr; struct Bonus { double quat[4]; double inertia[3]; int ninteger,ndouble; int iindex,dindex; int *ivalue; double *dvalue; int ilocal; }; struct Bonus *bonus; AtomVecBody(class LAMMPS *); ~AtomVecBody(); void settings(int, char **); void grow(int); void grow_reset(); void copy(int, int, int); int pack_comm(int, int *, double *, int, int *); int pack_comm_vel(int, int *, double *, int, int *); int pack_comm_hybrid(int, int *, double *); void unpack_comm(int, int, double *); void unpack_comm_vel(int, int, double *); int unpack_comm_hybrid(int, int, double *); int pack_reverse(int, int, double *); int pack_reverse_hybrid(int, int, double *); void unpack_reverse(int, int *, double *); int unpack_reverse_hybrid(int, int *, double *); int pack_border(int, int *, double *, int, int *); int pack_border_vel(int, int *, double *, int, int *); int pack_border_hybrid(int, int *, double *); void unpack_border(int, int, double *); void unpack_border_vel(int, int, double *); int unpack_border_hybrid(int, int, double *); int pack_exchange(int, double *); int unpack_exchange(double *); int size_restart(); int pack_restart(int, double *); int unpack_restart(double *); void write_restart_settings(FILE *); void read_restart_settings(FILE *); void create_atom(int, double *); void data_atom(double *, tagint, char **); int data_atom_hybrid(int, char **); void data_vel(int, char **); int data_vel_hybrid(int, char **); void pack_data(double **); int pack_data_hybrid(int, double *); void write_data(FILE *, int, double **); int write_data_hybrid(FILE *, double *); void pack_vel(double **); int pack_vel_hybrid(int, double *); void write_vel(FILE *, int, double **); int write_vel_hybrid(FILE *, double *); bigint memory_usage(); // manipulate Bonus data structure for extra atom info void clear_bonus(); void data_body(int, int, int, char **, char **); private: int *tag,*type,*mask; tagint *image; double **x,**v,**f; double *rmass; double **angmom,**torque; int *body; int nlocal_bonus,nghost_bonus,nmax_bonus; int nargcopy; // copy of command-line args char **argcopy; // for writing to restart file int copyflag; int intdoubleratio; // sizeof(double) / sizeof(int) MyPoolChunk *icp; MyPoolChunk *dcp; void grow_bonus(); void copy_bonus(int, int); //void check(int); }; } #endif #endif /* ERROR/WARNING messages: E: Internal error in atom_style body This error should not occur. Contact the developers. E: Invalid atom_style body command No body style argument was provided. E: Invalid body style The choice of body style is unknown. E: Per-processor system is too big The number of owned atoms plus ghost atoms on a single processor must fit in 32-bit integer. E: Invalid atom ID in Atoms section of data file Atom IDs must be positive integers. E: Invalid atom type in Atoms section of data file Atom types must range from 1 to specified # of types. E: Invalid density in Atoms section of data file Density value cannot be <= 0.0. E: Assigning body parameters to non-body atom Self-explanatory. */